PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21586
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 460aa    MW: 49876 Da    PI: 7.2448
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21586genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.8e-31197255259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  EMT21586 197 SDLWAWRKYGQKPIKGSPHPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 255
               699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.856191257IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.6E-31194257IPR003657WRKY domain
SuperFamilySSF1182903.01E-26194257IPR003657WRKY domain
SMARTSM007748.7E-38196256IPR003657WRKY domain
PfamPF031067.2E-26198255IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MAAADEATLK WAREDYAKME MERRHRALEE IAARRCGRDE GGVIFLVDSA DDAPPPPTKP  60
VRQGDAGQGC SKDGDNVKKE EADDGGDYSA FGAFFGLDQI GKSLKTKAMG HISESHARKQ  120
VVGLGATTNT PVEDFLRLQS GFPEVKKQNP HADAIRIGQE SGLGQPSRER KNQARKVVCI  180
PAPTTAGSRP TGEVVPSDLW AWRKYGQKPI KGSPHPRGYY RCSSSKGCSA RKQVERSRTD  240
PNMLVITYTS EHNHPWPTQR TARPGSTRSH HGKNGGGGGS GSGSKSSHNE KQTQNQNVKE  300
ERKDHRAAAT TTATTTTSTV TTTASTSPVV VKEETLAGSS SEAQARDQRA MDTVTGVLQQ  360
VDHRELMDQV FSESYRPMIP GSGQHHEDFF ADFADLAELE SDPMSLIFSK EYMEARPSGG  420
AGDHGGQEKA VAKELDPFDM LDWSTTSSTA GSTFEQGKRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A3e-17185257577Probable WRKY transcription factor 4
1wj2_A3e-17185257577Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014751268.11e-135PREDICTED: probable WRKY transcription factor 35
TrEMBLM8CEI10.0M8CEI1_AEGTA; Putative WRKY transcription factor 35
STRINGBRADI5G20290.11e-136(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-56WRKY DNA-binding protein 35